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Table 6 The distribution of CagA sequence types in different geographical regions

From: Diversity of 3′ variable region of cagA gene in Helicobacter pylori strains isolated from Chinese population

CagA type

Geographical regions

Total

FJ

SD

GX

YN

HL

HN

NM

QH

ZJ

BJ

NX

TW

SX

XZ

East Asian type CagA

ABD*

65

75

69

41

49

46

18

32

6

4

3

4

1

0

413

ABD′

0

1

3

0

0

0

1

0

0

0

0

0

0

0

5

AB-D′

0

0

0

0

0

0

5

0

0

0

0

0

0

0

5

AB′BD

10

3

1

24

1

0

0

0

0

0

1

0

0

1

41

AB′B′BD

2

0

0

3

0

0

0

0

0

0

0

0

0

0

5

AAABD

1

0

0

0

0

0

0

0

0

0

0

0

0

0

1

ABDABD

1

0

0

0

0

0

0

0

0

0

0

0

0

0

1

AD

0

0

0

0

1

0

1

0

0

0

0

0

0

0

2

AD′

1

0

0

0

0

0

0

0

0

0

0

0

0

0

1

A–D′

0

0

0

0

0

0

0

0

0

0

0

0

1

0

1

BD

0

1

0

0

0

0

0

0

0

0

0

0

0

0

1

AB′BB″DAB′

1

0

0

0

0

0

0

0

0

0

0

0

0

0

1

AB′B′B′B′BD

0

0

0

1

0

0

0

0

0

0

0

0

0

0

1

ABB″B″

1

0

0

0

0

0

0

0

0

0

0

0

0

0

1

AB′B′B′B′B′BD

0

0

0

0

0

0

0

0

1

0

0

0

0

0

1

D

1

0

0

0

0

0

0

0

0

0

0

0

0

0

1

Total

 

83

80

73

69

51

46

25

32

7

4

4

4

2

1

481

western type CagA

ABC

0

2

1

2

5

0

5

1

0

0

0

0

0

0

16

ABCC

0

0

1

1

0

0

2

0

0

0

0

0

0

0

4

ABCCCC

0

0

0

0

0

0

1

0

0

0

0

0

0

0

1

AC

0

0

0

1

0

0

0

0

0

0

0

0

0

0

1

Total

 

0

2

2

4

5

0

8

1

0

0

0

0

0

0

22

All CagA type total

 

83

82

75

73

56

46

33

33

7

4

4

4

2

1

503

  1. Isolates were from 14 regions: Fujian (FJ), Shandong (SD), Guangxi (GX), Yunnan (YN), Heilongjiang (HL), Hunan (HN), Neimenggu (NM), Qinghai (QH), Zhejiang (ZJ), Beijing (BJ), Ningxia (NX), Taiwan (TW), Shanxi (SX) and Xizang (XZ). * There was a significant difference in the presence of CagA-ABD type between different geographical regions (P < 0.01). CagA-AB′BD type was signifcantly associated with Yunnan isolates (P < 0.001). CagA-ABC type was signifcantly associated with Neimenggu isolates (P < 0.01)