From: Multi-drug resistant pathogenic bacteria in the gut of young children in Bangladesh
Primer | Primer sequence (5′ → 3′) | Target | Amplicon size (bp) | References |
---|---|---|---|---|
Stx2f | GGCACTGTCTGAAACTGCTCC | stx 2 | 225 | [12] |
Stx2r | TCGCCAGTTATCTGACATTCTG | |||
eae1 | CTGAACGGCGATTACGCGAA | eae | 917 | [12] |
eae2 | CCAGACGATACGATCCAG | |||
INT-1U | GTTCGGTCAAGGTTCTG | intl1 | 923 | [16] |
INT-1D | GCCAACTTTCAGCACATG | |||
mphA(F) | GTGAGGAGGAGCTTCGCGAG | mphA | 403 | [13] |
mphA(R) | TGCCGCAGGACTCGGAGGTC | |||
ereB(F) | TTGGAGATACCCAGATTGTAG | ereB | 537 | [13] |
ereB(R) | GAGCCATAGCTTCAACGC | |||
ermB(F) | GAAAAAGTACTCAACCAAATA | ermB | 639 | [13] |
ermB(R) | AATTTAAGTACCGTTACT | |||
INT1 | GCTGGATAGGTTAAGGGCGG | Sxt-integrase | 592 | [17] |
INT2 | CTCTATGGGCACTGTCCACATTG | |||
TEM(F) | ATTCTTGAAGACGAAAGGGC | bla TEM | 1150 | [14] |
TEM(R) | ACGCTCAGTGGAACGAAAAC | |||
OXA-F | ACACAATACATATCAACTTCGC | Bla OXA | 813 | [14] |
OXA-R | AGTGTGTTTAGAATGGTGATC | |||
SHV-F | CACTCAAGGATGTATTGTG | bla SHV | 885 | [14] |
SHV-R | TTAGCGTTGCCAGTGCTCG | |||
CMY-9(F) | TCAGCGAGCAGACCCTGTTC | bla CMY-9 | 874 | [15] |
CMY-9(R) | CTGGCCGGGATGGGATAGTT | |||
CTX-M1(F) | AACCGTCACGCTGTTGTTAG | bla CTX-M1 | 766 | [15] |
CTX-M1(R) | TTGAGGCTGGGTGAAGTAAG | |||
CTX-M2(F) | GGCGTTGCGCTGATTAACAC | bla CTX-M2 | 486 | [15] |
CTX-M2(R) | TTGCCCTTAAGCCACGTCAC | |||
TetA (F) | GTAATTCTGAGCACTGTCGC | tetA | 937 | [14] |
TetA (R) | CTGCCTGGACAACATTGCTT | |||
TetB (F) | CTCAGTATTCCAAGCCTTTG | tetB | 416 | [14] |
TetB (R) | CTAAGCACTTGTCTCCTGTT | |||
TetD (F) | ATTACACTGCTGGACGCGAT | tetD | 1104 | [14] |
TetD (R) | CTGATCAGCAGACAGATTGC |