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Table 1 Pathogens detected by microbiological culture and m-NGS

From: Severe asthma patient with secondary Citrobacter koseri abdominal infection: first case report and review of the literature

Sample type

Microbiological culture

m-NGSa

Species

Reads

Relative abundance (%)

Plasmab

Negative

Citrobacter koseri

979

38.36

Abdominal biopsy tissue

Citrobacter koseri

Citrobacter koseri

263, 387

78.30

  1. aCell-free DNA was used for mNGS
  2. bFrom peripheral blood drawn in the febrile phase
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Gut Pathogens

ISSN: 1757-4749